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KMID : 0364820190550040448
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Korean Journal of Microbiology
2019 Volume.55 No. 4 p.448 ~ p.450
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Complete genome sequence of a novel polysaccharide-degrading marine bacterium, Echinicola strongylocentroti MEBiC08714T
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Bae Seung-Seob
Jung Yoon-Hee
Woo Jung-Hee
Baek Kyung-Hwa
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Abstract
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Echinicola strongylocentroti MEBiC08714 T isolated from sea urchin Strongylocentrotus intermedius can degrade polysaccharides like agar, alginate, and starch. The genome was sequenced to identify the genomic basis of this activity. The genome is composed of 6,252,144 bp, 4,695 protein-coding sequences, and 44.1 mol% G + C content. The strain MEBiC08714 T encodes a large set of carbohydrate active enzymes including 187 glycosyl hydroxylases and 22 polysaccharide lyases. The large diversity of hydrolytic enzymes supports the use of E. strongylocentroti MEBiC08714 T as a candidate for biotechnological applications in enzymatic polysaccharide conversion.
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KEYWORD
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Echinicola, complete genome, degradation, polysaccharide
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